ISI –Web of Science Indexed:

No.Name
N.H.A Aziz, Z. Ibrahim, N.A.A. Aziz, M.S. Mohamad, J. Watada. Single-solution Simulated Kalman Filter algorithm for global optimisation problems. Sādhanā, Vol. 43, No. 7, pp.1-15, (2018), Springer. (IF: 0.592).
C.S. Seah, S. Kasim, MFM. Fudzee, J.M.L.T Ping, M.S. Mohamad, R.R. Saedudin, M.A. Ismail. An Enhanced Topologically Significant Directed Random Walk in Cancer Classification using Gene Expression Datasets. Saudi Journal of Biological Sciences, Vol. 24, No. 8, pp.1828-1841, (2017), Elsevier. (IF: 2.564).
A.M. Ismail, M.S. Mohamad, H.A. Majid, K.H. Abas, S. Deris, N. Zaki, S.Z.M. Hashim, Z. Ibrahim, M.A. Remli. An Improved Hybrid of Particle Swarm Optimization and the Gravitational Search Algorithm To Produce A Kinetic Parameter Estimation of Aspartate Biochemical Pathways. Biosystems, Vol. 162, pp.81-89, (2017), Elsevier. (IF: 1.652).
T.W. Shi, W.S. Kah, M.S. Mohamad, K. Moorthy, S. Deris, M.F. Sjaugi, S. Omatu, J.M. Corchado, S. Kasim. A Review Of Gene Selection Tools In Classifying Cancer Microarray Data. Vol. 12, No. 3, pp.202- 212, (2017), Current Bioinformatics. Bentham Science. (IF: 0.770).
M.A. Remli, M.S Mohamad, S. Deris, S. Napis, R. Sinnott, M.F. Sjaugi. Metaheuristic Optimization for Parameter Estimation in Kinetic Models of Biological Systems - Recent Development and Future Direction, Current Bioinformtics, Vol. 12, No. 4, pp.286-295, (2017), Bentham Science. (IF: 0.770).
M.A. Remli, M.S. Mohamad, S. Deris, S. Omatu, J.M. Corchado. An Enhanced Scatter Search with Combined Opposition-Based Learning for Parameter in Large-Scale Kinetic Models of Biochemical Systems. Engineering Applications of Artificial Intelligence, Vol. 62, pp.164-180, (2017), Elsevier. (IF: 2.368).
S. Fotoohifiroozabadi, M. S. Mohamad, S. Deris. Samira-VP: A Simple Protein Alignment Method with Rechecking the Alphabet Vector Positions. Journal of Bioinformatics and Computational Biology, Vol. 15, No.2, pp.1750004-24pages, (2017), World Scientific. (IF: 0.785).
C.S. Seah, S. Kasim, MFM. Fudzee, J.M.L.T Ping, M.S. Mohamad, R.R. Saedudin, M.A. Ismail. An Enhanced Topologically Significant Directed Random Walk in Cancer Classification using Gene Expression Datasets. Saudi Journal of Biological Sciences, Vol. 24, No. 8, pp.1828-1841, (2017), Elsevier. (IF: 2.564).
A.M. Ismail, M.S. Mohamad, H.A. Majid, K.H. Abas, S. Deris, N. Zaki, S.Z.M. Hashim, Z. Ibrahim, M.A. Remli. An Improved Hybrid of Particle Swarm Optimization and the Gravitational Search Algorithm To Produce A Kinetic Parameter Estimation of Aspartate Biochemical Pathways. Biosystems, Vol. 162, pp.81-89, (2017), Elsevier. (IF: 1.652).
T.W. Shi, W.S. Kah, M.S. Mohamad, K. Moorthy, S. Deris, M.F. Sjaugi, S. Omatu, J.M. Corchado, S. Kasim. A Review Of Gene Selection Tools In Classifying Cancer Microarray Data. Vol. 12, No. 3, pp.202- 212, (2017), Current Bioinformatics. Bentham Science. (IF: 0.770).
M.A. Remli, M.S Mohamad, S. Deris, S. Napis, R. Sinnott, M.F. Sjaugi. Metaheuristic Optimization for Parameter Estimation in Kinetic Models of Biological Systems - Recent Development and Future Direction, Current Bioinformtics, Vol. 12, No. 4, pp.286-295, (2017), Bentham Science. (IF: 0.770).
M.A. Remli, M.S. Mohamad, S. Deris, S. Omatu, J.M. Corchado. An Enhanced Scatter Search with Combined Opposition-Based Learning for Parameter in Large-Scale Kinetic Models of Biochemical Systems. Engineering Applications of Artificial Intelligence, Vol. 62, pp.164-180, (2017), Elsevier. (IF: 2.368).
S. Fotoohifiroozabadi, M. S. Mohamad, S. Deris. Samira-VP: A Simple Protein Alignment Method with Rechecking the Alphabet Vector Positions. Journal of Bioinformatics and Computational Biology, Vol. 15, No.2, pp.1750004-24pages, (2017), World Scientific. (IF: 0.785).


SCOPUS Indexed:

No. Name
1. J.A. Jupin, T. Sutikno, M.A. Ismail, M.S. Mohamad, S. Kasim, D. Stiawan. Review of the machine learning methods in the classification of phishing attack. Bulletin of Electrical Engineering and Informatics, Vol. 8, No. 4, pp. 1545-1555 (2019), IAES Indonesia Section.
2. C.S. Seah, S. Kasim, R.R. Saedudin, M.F.M. Fudzee, M.S. Mohamad, R. Hassan, M.A. Ismail. Topologically significant directed random walk with applied walker network in cancer environment. Pakistan Journal of Pharmaceutical Sciences, Vol. 32, No. 3, pp. 1395-1408 (2019), Faculty of Pharmacy, University of Karachi.
3. K. Moorthy, M.H. Ali, M.A. Ismail, C.W. Howe, M.S. Mohamad, S. Deris. An Examination of Machine Learning Algorithms for Missing Values Imputation. International Journal of Innovative Technology and Exploring Engineering, Vol. 8, No. 12S2, pp. 415-420. BEIESP (2019).
3. K. Moorthy, M.H. Ali, M.A. Ismail, C.W. Howe, M.S. Mohamad, S. Deris. Propose a new Firefly-Fast Learning Network model based Intrusion-Detection System. International Journal of Innovative Technology and Exploring Engineering, Vol. 8, No. 12S2, pp. 146-152. BEIESP (2019).
4. Quah Soon Wei, Muhammad Fahmi Aizat, Ashma Diyanti, Wan Mohd Faizal Ishak, Hasiah Salleh, Khairul Nizar Syazwan Wan Salihin Wong, HK Adli. Kappaphycus alvarezii sp., Sargassum polycystum sp. and Manihot esculenta sp. as photo-sensitizers in dye-sensitized solar cells. AIP Conference Proceedings Vol. 2068, 020028 (2019).
5. HK Adli, Khairul Nizar Syazwan Wan Salihin Wong, Nurul Natasyha Ikhsan, Mohd Sukhairi Mat Rasat, Nor Hakimin Abdullah, Mohamad Faiz Mohd Amin, Syed Muhammad Al-Amsyar. The potential of zinc chloride-Curcuma longa sp. extracts as photo-absorber in solar cell. AIP Conference Proceedings Vol. 2068, 020043 (2019).
6. HK Adli, Wan Marinah Izzati Wan Ismail, and Arlina Ali. The electrical conductivity properties of Morus Nigra L. sp., Clitoria ternatea sp., and Melastoma malabathricum L. sp. as natural photo-sensitizers. AIP Conference Proceedings Vol. 2068, 020051 (2019).
7. N. ChePa, N. Yusoff, N. Ahmad. (2019). Exploring the determinants for grading Malaysian rice. International Journal of Innovative Technology and Exploring Engineering, 8(5s), 199-203.
8. K.M. Daud, Z. Zakaria, Z.A. Shah, M.S. Mohamad, S. Deris, S. Omatu, J.M. Corchado. A hybrid of Differential Search Algorithm and Flux Balance Analysis To Identify Knockout Strategies For In-Silico Optimization of Metabolites Production. International Journal of Advances in Soft Computing and Its Application, Vol. 10, No. 2, pp.84-107, (2018), UTM
9. C.S. Seah, S. Kasim, M.F.M. Fudzee, M.S. Mohamad, R.R. Saedudin, R. Hassan, M.A. Ismail, R. Atan. An Effective Pre-Processing Phase for Gene Expression Classification. Indonesian Journal of Electrical Engineering and Computer Science, Vol. 11, No. 3, pp.1223-1227, (2018), Institute of Advanced Engineering and Science
10. N.A. Nasarudin, W.H. Chan, M.S. Mohamad, S. Deris, S. Napis, S. Kasim. Pathway-based Analysis with Support Vector Machine (SVM-LASSO) for Gene Selection and Classification. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 4-2, pp.1609-1641, (2017), Indonesian Society for Knowledge and Human Development.
11. N.N. Mohd Hasri, H.W. Nies, W.H. Chan, M.S. Mohamad, S. Deris, S. Kasim. Improved Support Vector Machine using Multiple SVM-RFE for Cancer Classification. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 4-2, pp.1589-1594, (2017), Indonesian Society for Knowledge and Human Development.
12. R. Mohammad Kusairi, K. Moorthy, H. Haron, M.S. Mohamad, S. Napis, S. Kasim. An Improved Parallelized mRMR for Gene Subset Selection in Cancer Classification. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 4-2, pp.1595-1600, (2017), Indonesian Society for Knowledge and Human Development.
13. R. Muhamad, A. Abu Samah, H. Abdul Majid, G. Sulong, M.S. Mohamad, S. Kasim. Review on Local Binary Patterns Variants as Texture Descriptors for Copy-Move Forgery Detection. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 5, pp.1678-1684, (2017), Indonesian Society for Knowledge and Human Development.
14. K.Z.M. Azmi, Z.Ibrahim, D.Pebrianti, & M.S. Mohamad. Simultaneous Computation of Model Order and Parameter Estimation for Arx Model Based on Single Swarm and Multi Swarm Simulated Kalman Filter. Journal of Telecommunication, Electronic and Computer Engineering (JTEC), Vol 9, No 1-3, (2017), pp. 151-155. UTeM.
15. M.A. Ismail, V. Mezhuyev, S. Deris, M.S. Mohamad, S. Kasim, R.R. Saedudin. Multi-objective Optimization of Biochemical System Production Using an Improve Newton Competitive Differential Evolution Method. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 4-2, pp.1535-1542, (2017), Indonesian Society for Knowledge and Human Development.
16. C.S. Seah, S. Kasim, M.S. Mohamad. Specific Tuning Parameter for Directed Random Walk Algorithm For Cancer Classification. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 1, pp.176-182, (2017), Indonesian Society for Knowledge and Human Development.
17. M.F. Arieef, S. Kasim, Y.W. Choon, M.S. Mohamad, S. Deris, S. Napis. A Hybrid of Integer Differential Bees and Flux Balance Analysis for Improving Succinate and Lactate Production. International Journal on Advanced Science, Engineering and Information Technology, Vol. 7, No. 4-2, pp.1615-1620, (2017), Indonesian Society for Knowledge and Human Development.


Proceedings / Conferences:

No. Name
1. K. Mohd Daud, Z. Zakaria, R. Hassan, M.S. Mohamad, Z. Ali Shah, "Improved Metaheruristics Algorithms for Metabolic Network Optimization" International Conference on Applied Computing 2019 (ICAC2019). Bangkok, Thailand, 4-5 February 2019.
2. A.G. Briones, J. Corchado, M.S. Mohamad, S. Omatu, G. Hernández, "Machine Learning Models for Electricity Consumption Forecasting: A Review", The International Conference on Computer Applications & Information Security (ICCAIS 2019). Riyadh, Saudi Arabia, 19-21 March 2019.
3. T. Ab Rahman, Z. Ibrahim, N.H. Abdul Aziz, N.A. Ab. Aziz, M.S. Mohamad, M.I. Shapiai, "Evaluation of Different Horizon Lengths in Single-agent Finite Impulse Response Optimizer", International Conference on Computer and Information Sciences (ICCIS), Jouf University, Saudi Arabia, 3-4 April 2019.
4. N.A. Ab.Aziz, Z. Ibrahim, M.S. Mohamad, M. Mubin, N. Mokhtar, M.I. Shapiai, "A Fitness-based Adaptive Synchonous-Asynchronous Switching in Simulated Kalman Filter Optimizer", International Conference on Computer and Information Sciences (ICCIS), Jouf University, Saudi Arabia, 3-4 April 2019.
5. B. Muhammad, Z. Ibrahim, M.I. Shapiai, M.S. Mohamad, K.Z. Mohd Azmi, M.F. Mat Jusof, "Oppositional Learning Prediction Operator with Jumping Rate for Simulated Kalman Filter", International Conference on Computer and Information Sciences (ICCIS), Jouf University, Saudi Arabia, 3-4 April 2019.
6. N.H. Abdullah, N.A. Abdul Ghani, M.K.A. Abdul Razab, A. Mohamed Noor, AH. Zamani, K.N.S. Wan Salihin Wong, M.F. Mohd Amin, (2019). Methyl Orange Absorption from Aqueous Solution by Corn Cob Based Activated Carbon, AIP Conference Proceedings.
7. Q. Soon Wei, M. Fahmi Aizat, A. Diyanti, F. Wan Ishak, H. Salleh, K.N.S. Wan Salihin Wong, H.K. Adli (2019). Kappaphycus Alvarezii Sp., Sargassum Polycystum Sp. and Manihot Esculenta Sp. as Photo-Sensitizers in Dye-Sensitized Solar Cells, AIP Conference Proceedings, Vol. 2068, No.1, 6 February 2019.
8. H.K. Adli, K.N.S. Wan Salihin Wong, N.N. Ikhsan, M.S. Mat Rasat, N.H. Abdullah, M.F. Mohd Amin, S. M. Al-Amsyar, (2019). The Potential of Zinc Chloride-Curcuma Longa Sp. Extracts as Photo-Absorber in Solar Cell, AIP Conference Proceedings, Vol. 2068, No. 1, 6 February 2019.
9. M.A. Fikir, F.F. Asri, W.M..F. Wan Ishak, H.K. Adli, R. Mamat, W.H. Azmi, G. Najafi, T. Yusuf, "Heat Transfer Performance based Water for Absorber Solar Collector", International Conference on Mechanical Engineering Research, 2019.
10. H.K. Adli, W.M.I. Wan Ismail, A. Ali, "The Electrical Conductivity Properties of Morus Nigra L. Sp. Clitoria Ternates Sp. and Melastoma Malabathricum L. Sp. as Natural Photo-Sensitizers", AIP Conference Proceedings, Vol. 2068, No,. 1, 6 February 2019.
11. Z.M. Yusof, Z. Ibrahim, S. Adam, K.Z.M. Azmi, T.A. Rahman, B. Muhammad, N.A.A. Aziz, N.H.A. Aziz, N. Mokhtar, M.I. Shapia, M.S. Mohamad, "Distance Evaluated Simulated Kalman Filter With State Encoding For Combinatorial Optimization Problems", International Conference on Robotics and Intelligent Systems 2018 (ICRIS2018), Kuala Lumpur, Malaysia, 12-14 Sept 2018.
12. K.M. Daud, Z. Zakaria, Z.A. Shah, M.S. Mohamad, S. Deris, S. Omatu, J.M. Corchado, "A hybrid of Differential Search Algorithm and Flux Balance Analysis to Identify Knockout Strategies for in silico Optimization of Metabolites Production", 4th International Workshop on Big Data Analytics (IWBDA 2018), pp 84-107, Johor Bahru, Malaysia, 24-25 July 2018.
13. M.K. Hon, M.S. Mohamad, A.H.M Salleh, Y.W. Choon, S. Deris, M.A. Remli, M.A. Ismail, S. Omatu, "A Hybrid of Simple Constrained Artificial Bee Colony Algorithm and Flux Balance Analysis for Enhancing Lactate and Succinate in Escherichia Coli", 12th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB'18), Toledo, Spain, 20-22 June 2018.
14. M.Y. Aw, M.S, Mohamad, C.K. Chong, S. Deris, M.A. Remli, M.A. Ismail, S. Omatu, "Parameter Estimation of Essential Amino Acids in Arabidopsis thaliana using Hybrid of Bees Algorithm and Harmony Search", 12th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB'18), Toledo, Spain, 20-22 June 2018.
15. B. Muhammad, D. Pebrianti, N.A. Ghani, N.H.A. Aziz, N.A.A. Aziz, M.S. Mohamad, M.I. Shapiai, Z. Ibrahim, "An Application of Simulated Kalman Filter Optimization Algorithm For Parameter Tuning in Proportional-Integral-Derivative Controllers For Automatic Voltage Regulator System", 2018 SICE International Symposium on Control Systems (SICE ISCS 2018), Tokyo, Japan, 9-11 March 2018.
16. H.W. Nies, K.M Daud, M.A. Remli, M.S. Mohamad, S. Deris, S. Omatu, S. Kasim, G. Sulong, “Classification of Colorectal Cancer Using Clustering and Feature Selection Approaches”, 11th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB'17), Porto, Portugal, 21-23 June 2017.
17. M.A. Remli, K.M Daud, H.W. Nies, M.S. Mohamad, S. Deris, S. Omatu, S. Kasim, G. Sulong, “K-Means Clustering with Infinite Feature Selection for Classification Tasks in Gene Expression Data”, 11th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB'17), Porto, Portugal, 21-23 June 2017.
18. C.S. Seah, S. Kasim, M.F.M. Fudzee, M.S. Mohamad, "A Direct Proof of Significant Directed Random Walk", IOP Conference Series: Materials Science and Engineering, Vol. 235. No. 1, pp. 1-6, 2017.


Book Chapter:

No.Name
1.

K. Moorthy, A.N. Jaber, M.A. Ismail, F. Ernawan, M.S. Mohamad, S. Deris. Missing-Values Imputation Algorithms for Microarray Gene Expression Data. In V. Bolón-Canedo, A. Alonso-Betanzos (eds), Methods in Molecular Biology: Microarray Bioinformatics. Vol. 1986, pp 255-266. Humana Press (Springer Protocol). 2019. ISBN:978-1-4939-9441-0. Indexed by SCOPUS.
2.

N.H.A. Aziz, Z Ibrahim, N.A.A Aziz, Z.M. Yusof, M.S. Mohamad. Single-Solution Simulated Kalman Filter Algorithm for Routing in Printed Circuit Board Drilling Process. In Hassan M. (Eds), Intelligent Manufacturing & Mechatronics, Lecture Notes in Mechanical Engineering. Vol. 649, pp 649-655. Springer, Singapore. 2018. ISBN: 978-981-10-8787-5. Indexed by SCOPUS.
3.

M.K. Hon, M.S. Mohamad, A.H.M Salleh, Y.W. Choon, S. Deris, M.A. Remli, M.A. Ismail, S. Omatu. A Hybrid of Simple Constrained Artificial Bee Colony Algorithm and Flux Balance Analysis for Enhancing Lactate and Succinate in Escherichia Coli. In F. Fdez-Riverola (Eds), Advanced in Intelligent Systems and Computing. Vol. 803, pp. 1-8. Springer International Publishing Switzerland. 2018. ISBN: 978-3-319- 98701-9. Indexed by SCOPUS.
4.

M.Y. Aw, M.S, Mohamad, C.K. Chong, S. Deris, M.A. Remli, M.A. Ismail, S. Omatu. Parameter Estimation of Essential Amino Acids in Arabidopsis thaliana using Hybrid of Bees Algorithm and Harmony Search. In F. Fdez-Riverola (Eds), Advanced in Intelligent Systems and Computing. Vol. 803, pp. 9-16. Springer International Publishing Switzerland. 2018. ISBN: 978-3-319-98701-9. Indexed by SCOPUS.
5. N.I.M. Dawot, N.S. Hasan, M.S. Mohamad. A Review of Gene Expression Data Clustering Techniques. In Sallehuddin et al. (Eds), Soft Computing For Knowledge Discovery and Data Mining. pp. 61-104. UTM Publisher. 2018. ISBN: 978-983-52-1543-8.
6.

H.W. Nies, K.M Daud, M.A. Remli, M.S. Mohamad, S. Deris, S. Omatu, S. Kasim, G. Sulong. Classification of Colorectal Cancer Using Clustering and Feature Selection Approaches. In F. Fdez- Riverola et al. (Eds), Advances in Intelligent Systems and Computing. Vol. 616, pp. 58-65. Springer International Publishing Switzerland. 2017. ISBN: 978-3-319-60816-7. Indexed by SCOPUS.
7.

M.A. Remli, K.M Daud, H.W. Nies, M.S. Mohamad, S. Deris, S. Omatu, S. Kasim, G. Sulong. K-Means Clustering with Infinite Feature Selection for Classification Tasks in Gene Expression Data. In F. Fdez- Riverola et al. (Eds), Advances in Intelligent Systems and Computing. Vol. 616, pp. 50-57. Springer International Publishing Switzerland. 2017. ISBN: 978-3-319-60816-7. Indexed by SCOPUS.
8.

M.S. Mohamad, S. Deris, S.Z.M. Hashim. Selecting Informative Genes from Leukemia Gene Expression Data using a Hybrid Approach for Cancer Classification. In F. Ibrahim, N.A. Abu Osman, J. Usman & N.A. Kadri (Eds.), IFMBE Proceedings. Vol. 15, pp. 528-532. Springer-Verlag Berlin / Heidelberg. 2017. ISBN: 978-3-540-68016-1. Indexed by ISI.


Book:

No.Name
1. Edited Book

F. Fdez-Riverola, M.P. Rocha, M.S. Mohamad, N. Zaki, J.A. Sáez. The 13th International Conference on Practical Applications of Computational Biology & Bioinformatics (Advances in Intelligent Systems and Computing). Springer. 2019. ISBN: 978-3-030-23873-5.
2.

Edited Book

F. Fdez-Riverola, M.S. Mohamad, M.P. Rocha, J.G. Paz, P. Gonzales. The 12th International Comference on Pratical Application of Computational Biology & Bioinformatics (Advances in Intelligent Systems and Computing). Springer. 2018. ISBN: 978-3-319-98701-9.
3. Edited Book

F. Fdez-Riverola, M.S. Mohamad, M.P. Rocha, J.F. Paz, T. Pinto. The 11th International Conference on Practical Applications of Computational Biology & Bioinformatics (Advances in Intelligent Systems and Computing). Springer. 2017. ISBN: 978-3-319-60816-7.
4.

Research Book

1.    C.K. Chong, M.S. Mohamad, and S. Deris. Parameter Estimation Using Computational Approaches in Metabolic Pathways. UTM Press. 2018. ISBN: 978-983-52-1494-3.
2.    N.H. Wen and M.S. Mohamad. Directed Random Walk Methods for Identifying Informative Cancer Genes. UTM Press. 2017. ISBN: 978-983-52-1434-9.
3.    M.F. Misman, M.S. Mohamad, S. Deris, and S.Z.M. Hashim. Pathway Analysis using A Hybrid of SVM & SCAD. UTM Press. 2017. ISBN: 978-983-52-1419-6.
4.    A.H.M. Salleh, M.S. Mohamad, and S. Deris. Hybrid Flux Balance Analysis Metabolites Production. UTM Press. 2017. ISBN: 978-983-52-1399-1.
5.    C.Y. Wen, M.S. Mohamad, and S. Deris. Hybrid Algorithms in Metabolic Engineering. UTM Press. 2017. ISBN: 978-983-52-1436-3.
5. Original Book

M.S. Mohamad. Sequence Alignment For Bioinformatics. UTM Press. 2018. ISBN: 978-983-52-1533-9.